rs260718722 SNP Detail

Summary

• ID
  rs260718722
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:32969363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATTTAACC TGAACCTTTT ATAAAACTGA
  TGGTATCATC ATGGGGACTA TTAGAAGGTC CACTCTAAGA ATCCTGAAAG ATTCCTTAAA
  Catgtacacg tatgcatata actacaatta atgaaaacag aagctatgaa tttgaaagag
  Y
  gaggcaggct aaacgggaag gtttggaggg aaaaaggaga aagggcaagt gatgttatta
  taatttcaaa aaCTGAGTAG TTTTTAAGTA AGGAACAAGA CATAAAACAG TGGCATTTGA
  AAAGGACAGG TGACTGGAAA GAGCAATATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780311	CHEV_6_32942428	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260718722					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32969363 () rs orientation: forward

Symbol	Name	Function Class
Chchd3	coiled-coil-helix-coiled-coil-helix domain containing 3	within coordinates
Gm53279	predicted gene, 53279	within coordinates
Gm66358	predicted gene, 66358	1754 bp downstream
Rr149014	regulatory region 149014	1763 bp distal
Tssr60215	transcription start site region 60215	1216 bp downstream