rs260742935 SNP Detail

Summary

• ID
  rs260742935
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61903171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTTTCTG AAGTTCTGGC TGCAAATCCA TAAAAAAACA
  AAGCATTGTG AGCCATTAGC CCTTCATCTA CCCACAGCTT GGGAGGAGTA TGGAGGCTAG
  CATTGCTGAG TTGTTCTCCT TCTCTATTGC CCATGGGGAC ACCGCAGATG GAATTCTAGG
  R
  GCCTTGGAGA GAGATCTGGA TTCCATTCTT CATGAGGAAA ACGAGATGGC TGGTGAGATC
  CCTGATGGCC ATCCAGGGCT GAGACTCTAA ACCACCACCT GCTGCGGCCA GATATCATTA
  CTGAAAACAA AGCGGGGTTC TGCTTTGATC TTCCCAGGCA AGAGCACAGG TTCCCAAATC
  AGGGCCAACA ATGCGGCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330718	CHEV_10_61530140	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260742935					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61903171 () rs orientation: forward

Symbol	Name	Function Class
D10Mit149	DNA segment, Chr 10, Massachusetts Institute of Technology 149	122 bp distal
Tssr93687	transcription start site region 93687	753 bp downstream