rs260756337 SNP Detail

Summary

• ID
  rs260756337
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:23475562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATGGAAA ACCTTTCTTT
  TCTCTCCATT CTTATGCCCT TTCGTTTTAG TACGTTTGTA CCTTAAACTG GTTGTCTTTT
  TTTTTTTTTT TTTTTTCTCT CTGACTCGTT TATACTTCAT CATGGTTCAA GTATCTTAGG
  TAGTCTTCTG TAATGTGTAG GTCACATATG TACCACCTCT TGTTCTTTAG CTGCCTTCAT
  T
  CTTCTCAGTT ACACTCCTTA GTCCTTGCAC ATGTGGTATT TACAAGAGAA TACATAGGAG
  CAGGCCAAAG AAATGAAGGA ATCACTCAGA TAACCCCTGA AAAGATCCCA AGGGTCTATG
  TATTTCAGGG TCCCCAACTG CAGAATAGAA GTGACAGTAA TTTTCCTGCC TACCTCACAG
  GGCTGTTGTG AGGGCAAAGC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324891327	CHEV_15_23405231	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260756337					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:23475562 () rs orientation: forward

Symbol	Name	Function Class
Cdh18	cadherin 18	1058 bp downstream
Cpgi6966	CpG island 6966	1256 bp distal
Gm56739	predicted gene, 56739	741 bp downstream
Tssr130794	transcription start site region 130794	1018 bp downstream