rs260869170 SNP Detail

Summary

• ID
  rs260869170
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44380514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATCTTATT CCCTCTAGTG
  AAGCGCAGCT CACACATTAG AGCACAGAGA CAGTTCGCAG GGTGCCCAGC TCCATCTCAC
  TTTGTCAGAA CTGACGGGGA GAACACAAAA CATTTGAATG GGTTGATAGA CAGGCTCAAG
  CGAGGCCGTG TGTTTTGTTC CCAAAGTAAA GTATGGTTTT AACCACAGAA AGTAACATTT
  R
  ATATTTCTGA ACCAGTGGGG AACTGAGCCA GTCTAGGTTT TAACCACTGT AGAACACGCC
  CACGGTAATC CTGACTCTGG AGGAGGGTGG ACAAGGACAT CAGAAGTAGT CACATAGCTC
  GACGGAGTAA GCGGACCACG GGCGTGTGCG TGCGTGCGCG CGTGCGTGCT TGCGTACTGG
  AGAGCTGGTC AGGCTGGACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100977	CHEV_4_44393386	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260869170					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44380514 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	41 bp proximal
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	1287 bp proximal