rs260878854 SNP Detail

Summary

• ID
  rs260878854
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37180106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATGTGGAA TATGACTGTA
  TTAGTTAGAG TTCTGTAGAG TAATGGAACT TATAGAATAA ATCTCTATTT CTCTCTCTCT
  CTCTCCCTCC CTCCCTCCCT CCCTCCCTCC CTCCCTCTCT CTACTCCCCC CACTGGATTT
  ATTAGATTAT AGAATGGTTT ATAGGCTGTG GTCCAGCTAT GGCTGCTTAT AAACAAAAGG
  Y
  TCAATAATCC AGTAGTTGTT CAGTCCTTGA GGCCAGATAT CTCAGATGCT CTCTAGTATA
  TGCCAGAATC TAGAAGGAGT AGGTGTTAAC ACCAGTGAAG GAATGGACTT GCTAGCTAGC
  GAGATCAACT GCAAGTAAGC AAAGAAAGAG AGGTTTCCAT ATTTAATATC CTTTAGAGCA
  TCCAGCAAAG GTGTGTCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324925491	CHEV_15_37109617	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260878854					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37180106 () rs orientation: forward

Symbol	Name	Function Class
Gm8664	predicted gene 8664	1483 bp downstream
Rr501177	regulatory region 501177	1775 bp distal
Rr501178	regulatory region 501178	1676 bp distal