rs260893751 SNP Detail

Summary

• ID
  rs260893751
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:49314210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTTCTAG ATGGTTCCAG
  CTGTCCTGAC AGTGAGGCCA TGAGGTCTTT TATTCCAATC TTAATTGCTA ATAATGCTCA
  GATCACATAT TTCAAAAAAA TCGGTTTATT ATTGTTGTAT GTGCGTTGTA TAGCTGTGTG
  TATCATCAGG GTCGTGCTTT TGTGTGTGTG TGTGTGGGGG GGGGTGTTTG TGCACGCGTG
  Y
  GAGCACGTAA GGCAGAAACA AGGTTTAGGA GTCAGTTCTC TCCTAATGTG GACCCTGGTG
  GGTTGAACTC ACGTTCTCAG GCTTTTACAG CAGGAGTCTT ACCCACAAGC CACCTTGCCT
  GCCCTCAGAC CACACATCTC CCTTCACAAT TGTGTGTAGT TTCAGAACAG CTACAAAAGG
  TTGATGACAG GGTTCGGAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321795966	CHEV_6_49287275	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260893751					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:49314210 () rs orientation: forward

Symbol	Name	Function Class
Ccdc126	coiled-coil domain containing 126	within coordinates
Tssr60889	transcription start site region 60889	1412 bp downstream