rs260942886 SNP Detail

Summary

• ID
  rs260942886
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74598127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttaactgcc tgtaccacta gctccagggg
  atctgatgct atgccatctt ttggggcctc tacaagtgga cacacacaca AATTAACATA
  GACTCTGACA TAAGcacaga cacacacaca gacacacaca cacacacaga cacacagaca
  Y
  acacacacac acaACTGGTG TACCTTTATC ttttgtttta ttcaagatag ggtttctctg
  tgtagccctg gctgtcctgg aactcactct gtagactagg ctagcctcaa aaattcagag
  atcagcctgc ctctgcctct gcctctgccg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323749432	CHEV_11_74520803	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260942886					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74598127 () rs orientation: forward

Symbol	Name	Function Class
D11Mit352	DNA Segment, Chr 11 Massachusetts Institute of Technology 352	within coordinates
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	within coordinates
Tssr109134	transcription start site region 109134	1671 bp upstream