rs261009478 SNP Detail

Summary

• ID
  rs261009478
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79512032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acctgggtg gccaagagct tgaggagcag
  atggccctgg cctccatgta ggcctcggga cccccgagcc agctccaact gtccccaggg
  ccttagactg cgctccctca cccccccaga gcggtatcct gtggcttccc atagccggac
  M
  cccgcctggc cccagtttgg ggtaagcgca gtcaaactcc cgagtcctgc ctccccgagt
  ggcccgagcc ctgtggtgga gaggactccg ggataccaca aaccctacaG TCCTGGGCTG
  GGATGTAGCA GTGATAGTGA GCTGGACTAA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325027743	CHEV_15_79458261	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261009478					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79512032 () rs orientation: forward

Symbol	Name	Function Class
Fam227a	family with sequence similarity 227, member A	within coordinates
Rr390973	regulatory region 390973	within coordinates
Rr505687	regulatory region 505687	312 bp proximal
Rr505688	regulatory region 505688	506 bp proximal