rs261010986 SNP Detail

Summary

• ID
  rs261010986
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:135239778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGG CTGGCCTTGA ACTCAGAAAT
  Y
  CGCCTGCCTC TGCCTCCCAA GTGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319989060	CHEV_1_137208617	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261010986					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135239778 () rs orientation: forward

Symbol	Name	Function Class
Cpgi788	CpG island 788	1259 bp proximal
Rr367008	regulatory region 367008	1609 bp upstream
Rr419124	regulatory region 419124	375 bp distal
Rr419125	regulatory region 419125	1071 bp proximal
Rr419126	regulatory region 419126	1728 bp proximal
Timm17a	translocase of inner mitochondrial membrane 17a	Intron
Tssr13839	transcription start site region 13839	1689 bp downstream