rs261040195 SNP Detail

Summary

• ID
  rs261040195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101204026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAATAAAT ACCCAATAAA
  AAAAAGGGGG GGGAGGAGAA TACTTTCTTG GTCTGTAGAG ATGGCTCAGT AGTTAAGAGC
  AAATGTTGTT TTTGTAGAAG ACCTGAGTTA GAGTCAGATA TTGGGCAGCT CAAAACTATC
  TGTAACTCCA GCTCCAGGAG ATCATGCCTT CTTATGGCCT CAGAGAATAC ATGTACACAC
  R
  CATGATTAAA ATTGCTTGCT TTAGTCTGAC CTTGAAAGTT TCTCTGTGGT TCCTTGCTCT
  CTCAGCACCA GCTTAGCTCT AACTAATTTT ATATTTAGTC AACTAGCACT TTGTTGAGTG
  GTTCAGGGCT CCAGTTACCT TAATAACAGG AATCAACACT CTAAATAGCT GCAAAGAGTG
  CTTCAGACAC TATAAATATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149591	CHEV_9_101229157	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261040195					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101204026 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	1575 bp proximal
Rr202333	regulatory region 202333	1196 bp distal
Rr202334	regulatory region 202334	694 bp distal
Rr206996	regulatory region 206996	within coordinates