rs261121634 SNP Detail

Summary

• ID
  rs261121634
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120087195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAACTAAC TAACTAAGAA
  GAGCAGCTTG TGCTTGTAAC CACCAAGCCA ACCACTAACC ACTCTTCAGC CCTCTTTTCT
  TCTCTTTAGT GGCTGAGACT CAATCGTATG GATACCCTGC ACTTTACCAG TTTGTTTGCA
  AGCATTGTCA CCAGTCCAAA TTCATTTCTA AATTTAAAAA CCAAACAAAC AAACAATATT
  R
  ATTTGCTTCT GTCACAAGGC CTGGGATGAA CCATCCCTGG TGGTTCTAGC TATGTCCTGT
  GCAGTTGCGA CCTTGGGGTC ACTACTTGTC CAGTGTCATG TTCATTGTTG ACTAGTTTTC
  TCAGACTGAC CAGCTAGCTT AGAATAAAGA CAATGTTGCA GCGTCTTCCA AGAAATCCTC
  ATATTTTTCT GTATCTCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323226207	CHEV_9_120167247	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261121634					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120087195 () rs orientation: forward

Symbol	Name	Function Class
Gm38642	predicted gene, 38642	1083 bp downstream
Gm47059	predicted gene, 47059	within coordinates
Rr207892	regulatory region 207892	1207 bp proximal