rs261151948 SNP Detail

Summary

• ID
  rs261151948
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:43446169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTACTTC CCCCAGTGAA GTATGAATGT
  ATCTTTACTA GCTTCTAAAC TTTGACCTTG GTATCCAATT TCCTCACTTC AGGGTGGGAA
  TGACCCTTTG CTGTGCAAAG ATTAGCTACT GAGGACTGGG TTACTGATTG ACCTGGTTGA
  Y
  CTTAGACCGG CAGGGTCAGG AGGAGATCTT TAATTTGTTA TTCTTTCATT ACAACTGATC
  AGATTTTGGT AAGTGCAATC TTTTACCTGG GAAAATGCAG CTAATAAATA AAACCACGAA
  GACGGAATTT TCAAAATTTC AAGCCTCAGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320267213	CHEV_2_43411677	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261151948					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:43446169 () rs orientation: forward

Symbol	Name	Function Class
Kynu	kynureninase	within coordinates
Rr396942	regulatory region 396942	306 bp upstream
Rr556278	regulatory region 556278	1341 bp distal
Rr556279	regulatory region 556279	793 bp distal
Rr556280	regulatory region 556280	within coordinates
Tssr17589	transcription start site region 17589	819 bp downstream
Tssr17590	transcription start site region 17590	802 bp downstream
Tssr17591	transcription start site region 17591	790 bp downstream