rs261155040 SNP Detail

Summary

• ID
  rs261155040
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117641496 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGGGGGC CAGAAAAGTG
  TCAGGTTCCC TGGAGCTGGA GTTACAGTTG GTTTATGGGT GCTGGGAACT AAACTTGGGT
  CTTCTGTAAG AGCAGAAAGC TATAGACAGT AACAATGTAA CAGTAACTTT GAGAAAACAA
  TGTAACAAAT ACTGAGACAA TTAGATGTTA CTATATAAAA TGGTTAACTC TGTCTATAGT
  Y
  AAATACCTTC TAGAGCAGTA AGCTTTCTCA ACCCCGTGGG TGGACAAGGG TTCCCATATC
  AGATATCCAC TTTACCATTC ATAACAGTAG CAAAATTATA GTTTGGAGGT AGCAATAAAA
  TAATGTTATG GGTGGGGTTC ACCACCCCAT GAGGACTATA TTAAAGGGTG CAGTACTAGG
  AAGGCCGAGG ACCGCTCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323499623	CHEV_10_117242647	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261155040					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117641496 () rs orientation: forward

Symbol	Name	Function Class
Gm67590	predicted gene, 67590	within coordinates
Rr218193	regulatory region 218193	96 bp distal
Rr221673	regulatory region 221673	720 bp proximal
Rr225990	regulatory region 225990	496 bp distal
Rr385360	regulatory region 385360	within coordinates