rs261160758 SNP Detail

Summary

• ID
  rs261160758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104729806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCATGGTTA AGAGGAACTG
  AGAGTTCTAT ATCTTCATCT GAAAGCTGCT AGCAGAATAC TGACTTCCAG GCAGCTAGGA
  TGAAGGTCTT AAAGCCCATG CCCACAGTGG CAAGCCAACT CTAATAGGGC CACACCTTCT
  GCAGCTGAGC ATATACAAAC CATCACACCT TCCATCAAAG CCAGGGCCAT AAAAGTTCTG
  R
  ATTTGATCCT CTCATAGACG TAAAACTCCA AAATTGAGGA CTGGAGAGAT GGCTCAGCAG
  TTACTGGCTG AACCACTTGC TCTTCCCAAG TTCAAGTCCC AGCACTCACA TGGCAGCTCA
  CAATTGTCTG TAACTCCAGT TCCAGGGGAT TGGATACCGT CACATAGACA TGCATGCAGA
  CAAAATACCA ATGCACATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323170381	CHEV_9_104754937	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261160758					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104729806 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Rr198572	regulatory region 198572	595 bp proximal
Tssr86829	transcription start site region 86829	1850 bp upstream