rs261181558 SNP Detail

Summary

• ID
  rs261181558
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105437583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGT AGTCTGAGAG TGTATTTCCC
  Y
  AGATAAGTAA AATGAAAAAC TGGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370580	CHEV_7_112936890	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261181558					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105437583 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19545	CpG island 19545	304 bp distal
Dchs1	dachsous cadherin related 1	722 bp upstream
Rr652815	regulatory region 652815	733 bp distal
Rr652816	regulatory region 652816	232 bp distal
Tssr74105	transcription start site region 74105	882 bp upstream
Tssr74106	transcription start site region 74106	853 bp upstream
Tssr74107	transcription start site region 74107	821 bp upstream
Tssr74108	transcription start site region 74108	737 bp upstream