rs261193116 SNP Detail

Summary

• ID
  rs261193116
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121382622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGTGAAGG AGAGATAAGG AGAGAAAACT TGGCGAGGAA
  GGAATATTGC CTCCCCCATC CTCAAGTCCT TGTGGTTAGA TGGAGTTATG TTAAGACCCA
  Y
  GCCCCACACC CAGAGAGGAG TGTGACTTTG GAGCGGGAAA CAAATCTCTT GTGGCCGAGC
  TAAGTTCCTT CTATCACAAG TTAAAGCGGT GGGTGAAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320904034	CHEV_3_121291891	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261193116					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121382622 () rs orientation: forward

Symbol	Name	Function Class
Gm33485	predicted gene, 33485	within coordinates
Gm65965	predicted gene, 65965	1179 bp upstream
Rr584122	regulatory region 584122	within coordinates
Tssr1037	transcription start site region 1037	405 bp downstream