rs261197402 SNP Detail

Summary

• ID
  rs261197402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:56923470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaaaaaaag aaaaaaGTCT CGACTAATTA
  TTCTCTCTGT CCTTAGTTCA TTGGGTCACT GACATTTCTA GCTACCTAAT TTTTGTCTTC
  TAAATGATCA ACAAGTTTCT CTCCAGTCAG GATTTCCTAT TTCCATCAAA TACACCAAGA
  R
  CCACTCAGTT CTGAAGCTTA GATGATGACC TAATTCCTCT TTCTTTTCCC AGCCTGCTAT
  CTACTCTCGC CATGCCTTAC TGATGCTCTG CCACTCAGGT TGGTGGCTTC CTGTCTTTCT
  CACCATTGCC CCACACACCC CAGGTGTCAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319733280	CHEV_1_56941155	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261197402					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:56923470 () rs orientation: forward

Symbol	Name	Function Class
Gm51624	predicted gene, 51624	1086 bp upstream
Satb2	special AT-rich sequence binding protein 2	within coordinates