rs261199029 SNP Detail

Summary

• ID
  rs261199029
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39251848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACTCTGAG ATCTAAATAC
  AGTTTTCTCT ATGCAGCCCT CCTGCACCTT CACCACCAGG GTGAGCTCTC CAGCATTCCC
  AGCCAGTTCA CTGTGGCCCA ACTCTTGCTT TCATGTCCTT TAGGGTCAGG GCTCTACTCT
  ACTGCCCAGT TGAGGTACAG GCACTTGAAT GATTCAGCCA GCCAGAGCTT GGCCGGTTAA
  Y
  ACCTTCACCA TCAGGGCCAG CTCTACTATG TTGCTCATCT GAGTGCTACA GGTGCCAAGG
  GGTGGGACCA GCTCTCTCAC TCTCACGAAC TTGGGGTCAG CTCTTCCCGC TGTCTTAGGT
  GTGTGGGGAG CACTTCCCTT GTACGTAGAC CACCTCACAG CAGGCCAGTT CTCATGTGCT
  CATACTGTCA TGGCTCGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324322189	CHEV_13_39159741	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261199029					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39251848 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	1272 bp upstream
Rr388296	regulatory region 388296	1441 bp upstream