rs261208447 SNP Detail

Summary

• ID
  rs261208447
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:86740462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctcagtatc agagtgcttg tccgttgtgt
  tcaaggtcct agtttaatca ctagtgccac aaaaaaatag gtagatagat acatagatac
  atagatagat aaagagagaa ggagagagag atatgggtag atggatggat agatgataga
  K
  atagatagat agatagatag atagatagat agatagatag atagataggg atatagctat
  atcatagata aatagatgat agatagatag atagatatag atatagatat agatatgtat
  atggatatgg atatggatat ggatatggat                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321599006	CHEV_5_87021628	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261208447					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:86740462 () rs orientation: forward

Symbol	Name	Function Class
Tmprss11f	transmembrane protease, serine 11f	within coordinates
Tssr51538	transcription start site region 51538	1131 bp upstream