rs261247463 SNP Detail

Summary

• ID
  rs261247463
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:53213822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggagactat ataagaacac tggaagaagg
  aagattctat cttcttcacc ttcttgcctc gtggggctga actactgcta gatccttgga
  ccaatgttgg ggagttgaag tacagactgt aagtcatcaa attctcttac ccatgagttc
  Y
  gtgactctag agaacctaat acacacatac tgggtaaaaa ctctaccaca gagctacatc
  tcaaggcccC AAACTTTCAC TCAGGAAATT CATCTGAAgg ggggaaggtt ggaagacggg
  cagataagag gggatgggga gatgagcagg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323672272	CHEV_11_53136497	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261247463					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:53213822 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2860	CpG island 2860	1596 bp proximal
Gm74485	predicted gene, 74485	within coordinates
Tssr101382	transcription start site region 101382	1679 bp upstream
Tssr107917	transcription start site region 107917	1595 bp downstream
Zcchc10	zinc finger, CCHC domain containing 10	1694 bp upstream