rs261321907 SNP Detail

Summary

• ID
  rs261321907
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45315996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATG TAGTTTGTAT GTATGCATGC
  R
  CATATGTATA TATGTATGCC TGTAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322943297	CHEV_9_45212781	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261321907					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45315996 () rs orientation: forward

Symbol	Name	Function Class
Fxyd2	FXYD domain-containing ion transport regulator 2	within coordinates
Gm68814	predicted gene, 68814	within coordinates
Rr677905	regulatory region 677905	711 bp proximal
Rr677906	regulatory region 677906	1048 bp proximal
Tssr84785	transcription start site region 84785	1540 bp downstream
Tssr84786	transcription start site region 84786	1509 bp downstream
Tssr84787	transcription start site region 84787	1488 bp downstream
Tssr84788	transcription start site region 84788	1457 bp downstream
Tssr84789	transcription start site region 84789	1430 bp downstream
Tssr84790	transcription start site region 84790	1237 bp upstream
Tssr84791	transcription start site region 84791	1368 bp upstream
Tssr84792	transcription start site region 84792	1416 bp upstream