rs261326476 SNP Detail

Summary

• ID
  rs261326476
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:93452430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTAGAATG AATACATTTC
  AACATATAGA AAGAGGATTT ATTAGAATGA CTTACAGGCT ATGGTCAAGC TAATCCAATA
  AAGGCTGCCT ATGAACAGAT CAAAGAATTC AGTAGTTGTT CAGTCCATGA ATCTGCATGT
  CTTGGCTGGT CTTCAGTATA TGCTGGAATC CTGAAGAAGT GTGCTCTAAT GCCAGGGAAG
  R
  AAGATGCTTG CTTGTGAGGT CAGAGTAAAC AGTCAAAAAG CAAAAGCTTC TCATATGAGC
  GTCTAGCAAA AGGCATGGCC AAGATTAGAG GTTGTCTTCA CACCTCAAAG TTCCAGACTA
  GAATTCGATC TCCCTACTTC AAATTAAGCA AAAATTTCTC ACTGGTATCC TCCTACAATT
  ATAGATATAT TTAGGTTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321615085	CHEV_5_93733597	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261326476					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:93452430 () rs orientation: forward

Symbol	Name	Function Class
Gm72287	predicted gene, 72287	within coordinates
Tssr51943	transcription start site region 51943	1855 bp downstream
Tssr51944	transcription start site region 51944	1867 bp downstream
Tssr51945	transcription start site region 51945	1879 bp downstream