rs261392436 SNP Detail

Summary

• ID
  rs261392436
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109907062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGACAATA TCCCCTGCAG
  AAACCAACTC CTCAACCCAA AAAAGTCTAT GACCCAGGAA GACTTCAGTG TCTTCTGCCT
  GAAATCAATA TAATCTGCCA CTCGCCAGGG GAAACGGTGG CCCAGGAGAG GCAGGAGCTT
  GGCACCTGGA ACAGCTTACT AGGGGTGCAG AGAGGACGCC TGAGACTTTC CCCAGATGCC
  K
  CAGGGCTGGA TCAGAACCCA GAAGCTCACG GCCACACCCC AGCATCTCTG TGCTTCCGAG
  GCCCAAATGG TCACAGTTTA GATGGAGCCT TGGCCCCATG CCGCTCCTGA GTACTGCACA
  GTGCAGAGCC AACCTGACAT CACAGCACTC AGAGGTTCTT TTTCTTAAGA AATAAATTTA
  ATTCTGGGTG GTTAGTGAAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322395876	CHEV_7_117451369	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261392436					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109907062 () rs orientation: forward

Symbol	Name	Function Class
Rr159223	regulatory region 159223	1662 bp distal
Rr159224	regulatory region 159224	862 bp distal
Sbf2	SET binding factor 2	158 bp downstream