rs261397058 SNP Detail

Summary

• ID
  rs261397058
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:109509302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGCTCCT GAGGGGCAGG
  GTCTTTGCAC ACATGTTGCT GCTCTTTACA AGAACTTAAA AAATGAGGGG TTGTTTCTCC
  CAGTTTTCAA ATGCAGAAAG CCTAGAGTCC CTGCAGCATA AGCCTATTAG GTGACCATGT
  TGATGGATTC ATGATACATG ATATTAGCCA CCTGACTGAT TTGTGCCAAT TTGATGAAAA
  C
  ATTTCCATCT GGCAGGGAAA AAAAAGACAC AAGTTTGAAT CCTTGTGTTA TTTTTAAGTT
  ACCAGCTTGT GTCTACAGAC AAGTGCACAC TTTCTATCAA TTCTGAGTTT CCTGATTGGT
  AGAATGGGAT TTTTTTTAAA AAGGAAGGCC CAAACCAACC CTTGCCTTGA AGGAGTTATG
  AATATTAAAT AAGGAAATGC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321254430	CHEV_4_109324710	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261397058					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109509302 () rs orientation: forward

Symbol	Name	Function Class
9630013D21Rik	RIKEN cDNA 9630013D21 gene	322 bp downstream
Gm12811	predicted gene 12811	within coordinates
Gm40227	predicted gene, 40227	1910 bp upstream