rs261400712 SNP Detail

Summary

• ID
  rs261400712
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128847843 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAGAGAA ACAATTTAGA
  CTAAAGGCCA TTGCCACCTC CTGGTGAGGC ACAGGAAGTC AAGTAACTCT ACACCTGGAA
  CATGGGGGAA CATTGGAGGA CCATTGGTAA ACACCCTCTC TGCACAAGAC AACCTCCCAA
  CTCCATGTCA ATTCAATACC TATCTGTTAA ATGTCTGCTG AGCAGCAGGT CCCAGAGTGG
  R
  GACAGCAGGG AATGTTGAAC ACAAGCCCCA GTGACCAGGA GGCAAACTCT CCTTAGAACC
  TTCAAAGTGT GGCTTTGTCT CTAAACATTA AGCATGAACC AATACAGTTC AGCAGGCGGC
  GCTAATAAGC TATCACAGTG AAGCTGCTTG CGGGAGTCCA GATCATTCTG GTGTGAGGAC
  AGATGACCGT GGAGGCAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321688109	CHEV_5_129276654	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261400712					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128847843 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	within coordinates
Rimbp2	RIMS binding protein 2	within coordinates