rs261411349 SNP Detail

Summary

• ID
  rs261411349
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75209037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGCAGTCC AAGGTTAAAG
  CATGGTTGCC AAGCATATGA AACACCAGCT CAAAGACAGC TGGTGGCTTT TTGATCGTTC
  CAGTCCTGCT GAGAAGGAAT AGAAACATAA ACCAAGATCT GATTTTCAGC TCGCGCTCGT
  GCGCGCGCGT GCATACGTGC ATGTGTGTGT GTGTGTGTGT GTCTACCACA ATGTGTGAAT
  W
  GAGGTCAGAG GACAACTTAC AAGAGTCAGT TATCTTCATC CATCTCACGG GTCCCTGGGA
  TCAAACTCAG GTTGTCTGGA TTGGCAGCAA GTGCCTTTCC CCACTGAGCC ACGTCACTCA
  GCAGCTCATC TTGAGGCATA GAGCAAATGG GCAGAGCCCA GTGGAAGCAG ATCTGCAGAC
  CCATTTTTCC ATGATCATCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323007834	CHEV_9_75149562	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261411349					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75209037 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197409	regulatory region 197409	564 bp proximal
Rr197410	regulatory region 197410	1164 bp proximal