rs261424162 SNP Detail

Summary

• ID
  rs261424162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:111257561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tatatgatg gccagcagag ggcatcagtt
  cccctggacc tggagttaca ggtgaaatta taggtgattg tgatcggcct tatgggtgtt
  agagactgaa tccgagtcct ttgcaggacc agttggtgct cctaaccact gatccatcta
  R
  tcaccccTTG Atttcatttc tgagacaggg tctcacgtaa cacaggctac ccttgaattc
  actatgtagc tgaggggttc ttaaatttct gatcttccag cgttagcctc ctaacattct
  gggatttgac aagtaggcca ccatgcctat                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323196670	CHEV_9_111330997	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261424162					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:111257561 () rs orientation: forward

Symbol	Name	Function Class
Rr192826	regulatory region 192826	within coordinates
Rr198795	regulatory region 198795	40 bp proximal
Rr202628	regulatory region 202628	211 bp distal
Rr202629	regulatory region 202629	98 bp distal