rs261428134 SNP Detail

Summary

• ID
  rs261428134
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:13722647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGTAGCCA CCAATCAAAT CTAAGATTGT
  AGTTTAAGTA ATTAGCCTTG TGAGCTGACA GGAAATGCTC AGGGGTGACA CGGGCTGGAT
  ATGCTTGtac atatgtgtgt gtgtgtgtgt gtgtatatat atatatttat atatatatat
  W
  tatTCATATT CATTCTCCCT TCATGGACAC CCATGTTACA AGGTTGTGAG ACTTTAGAAA
  TAACgagata ggctgggagg cttagtgcac ttgcagttat cccagaggac ctgaattcag
  tttccagtat tgctgagcag ttcacaactg                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322508957	CHEV_8_13672647	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261428134					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13722647 () rs orientation: forward

Symbol	Name	Function Class
4930442M18Rik	RIKEN cDNA 4930442M18 gene	279 bp downstream
Rasa3	RAS p21 protein activator 3	Intron
Rr400766	regulatory region 400766	1999 bp upstream
Rr659980	regulatory region 659980	675 bp distal
Rr659981	regulatory region 659981	339 bp proximal
Rr659982	regulatory region 659982	674 bp proximal
Tssr76418	transcription start site region 76418	1842 bp upstream