rs261450087 SNP Detail

Summary

• ID
  rs261450087
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11684904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGA CTTGACACCC CCGGCTACGA
  R
  GGCAGCGCCC ATCCCTCCGT GCCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492724	CHEV_8_11634904	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261450087					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11684904 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	within coordinates
Cpgi20087	CpG island 20087	within coordinates
Gm64331	predicted gene, 64331	466 bp upstream
Mir7238	microRNA 7238	790 bp downstream
Rr400761	regulatory region 400761	814 bp upstream
Tssr80389	transcription start site region 80389	122 bp downstream
Tssr80390	transcription start site region 80390	148 bp downstream
Tssr80391	transcription start site region 80391	737 bp downstream
Tssr80392	transcription start site region 80392	789 bp downstream
Tssr80393	transcription start site region 80393	825 bp downstream
Tssr80394	transcription start site region 80394	841 bp downstream