rs261481171 SNP Detail

Summary

• ID
  rs261481171
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97116330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGATGTATC TCTCAGTCTC
  TGTAGGCTTC TTTGCCAAGT TGAGGAGCGA GGTCCGACTG TGACTTCGGC TGACGGTGGC
  TGGGACAGGA GTGGCTGGGG GGTGTTTTAA AAGCTCTTTA TGCCCTTGAC TTCACTGTCT
  GGATCATCTC AGAGTTTCCA CCTGTAGAGC GTGTATCCTC TGAGAATTGA TCACACTGTC
  Y
  TCATCCTTTG AATATCAGGT ACTTTTAAAT TGAATTTTAG GCATTTTGGG CATCACATTA
  TAAGTCTTTT GGTCTTCTTA TCTACCATGG GGAATGTTGA TTTATATTAT TAGCAGGTAA
  TCAGCCTCAT TAGGTTCAAA GTTTTCCCTT GACATTTGCA GATGGTGGTT GCAATGGAAG
  CCTAGCTTCT GAAGCCTTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117122	CHEV_9_97134696	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261481171					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97116330 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	177 bp upstream
Rr383804	regulatory region 383804	1339 bp upstream
Tssr2982	transcription start site region 2982	104 bp upstream