rs261487466 SNP Detail

Summary

• ID
  rs261487466
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129840097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAGCAAGA TTAGTGATTC
  TTCTCTTTCC CTCAAATGAC CGGTTATTCT AACTCAATCG TGAACTGGTC TAGTAATAAT
  TTCAGTATTA GAGTATCCCA GGGAAGATAG CAAAATATTC TTAATTACTT ACAAAGTTAC
  ATTAGAACAC AGCCTCCTCT CCCAGAAAGA TTGCAGCCTT TCTGTGATTC TCAAGGTCAC
  Y
  GCCCCCACAC CTGGAGCTCT AAGTCTAAGC TTGATTGTTG CTAATTTGCA ATTGAATGGA
  GTACCTGGAC TTCCCTAAAA GAAGCTTTTG TACTGTGCCT TTAACTGTCT CTACTTTGTT
  TTTCAGGCAG CTCAGTCAAC TCCCTTTAGC TTGACTGCAG CAGGCGTGCA TCCCCTCCTC
  CAACAGCTCA AGAAGCATTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543553	CHEV_10_129441284	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261487466					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129840097 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	within coordinates
Tssr96487	transcription start site region 96487	128 bp upstream