rs261496236 SNP Detail

Summary

• ID
  rs261496236
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:13388499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTATATAG AGGCCGGAAG
  AATGACCATA TCAGAGTGTC AGGCTTCTCT TTGTCTCACT GTGAAACCTG AACAATTTTA
  ATGGAGCCAG ACACGAATGA TTCTTGGGGA CTGTGTAGTA TGCTGGTTAC ACTGCTTGCG
  GTGTTATATG AAGCTTTGCC TCTACTCTTC ACCAGTCATG TGACTTGGAC CAGACATAGA
  Y
  GCTCCTTAAG GTTCTTAAGT ACATGTAGGT ATGTGGCTGC AAGTAACAGG GTAACACTCG
  CATATGTAAG TGACTGTTTT ACAGTGAGTG AGCAAAGAGG TATGTGTGTT TGGGTTGAAT
  GTGTGCATAC ATTTGTATCA GTTCACTGTC ACGGAGAAAA CTTGGTCCCA GAGCCCATTA
  ACCTGATTTT TTTCCTTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325305856	CHEV_17_13362478	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261496236					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:13388499 () rs orientation: forward

Symbol	Name	Function Class
Gm36798	predicted gene, 36798	750 bp downstream
Rr392305	regulatory region 392305	563 bp downstream