rs261579777 SNP Detail

Summary

• ID
  rs261579777
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115833168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAAATATA TTAAAGCTTC
  CCTCAAACGA GCTAGAAATA GAGCTGCCAC CAGGCATTCT TCTCCTGTCA TTGCATGGGT
  AACTAAAGGA ATGAAATCAG TGTATTGAAG AGGTGTAGCT GGTCTGTGCT ACTTTGTAGG
  CTCCTTTTTC TTCTACCCTT CGCCACCCTT TATCCACCCC TTCAACTCCC TAACACTAGA
  S
  AGGAGAGGGA AAAAAAAGAA TAAAGAGGAG AGAGGAAAAG ATCCCTGAAC CTAATTTCTT
  CTTTCTTTTT TTGATCACAA CTACTAATAA CCCTCAACCA CCACCACCCC TGAATGACCA
  ACAACCACCA TAGCCCACCA ACTACCAACC TCACCTCTCA AGGTCCTAGC ATTTATATGC
  CCTCTGAAAA GTTCCCAGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894099	CHEV_3_115742437	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261579777					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115833168 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	1445 bp proximal