rs261747565 SNP Detail

Summary

• ID
  rs261747565
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:98619399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATACCTCCT ATAGTTGCCT CACCTGGTCA
  GATGCTGACA ATACTCTTCT CAGTATGTGG GAGATGATTT GGGTTCTCCT ACATTGGTAT
  ATTTAATTCT TAGAGATAGA ATTTTCTCCA TGCTTGATGT TTACAATAAG CTTGAAGATA
  C
  ATTTTAATTT CAGGCCCAAT TACTGTTTTC CTACTAAATG TTACTAGAGA ATGCTATTTT
  TCAGTTCTTA TGGGACCACC CAATTAACAC AGCTCTATTG CTTGTACATT TGCCTGTTTA
  AATTTGTTAA AAGTGTCAGG AAAGTATAGA                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319867612	CHEV_1_100588251	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261747565					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:98619399 () rs orientation: forward

Symbol	Name	Function Class
Tssr8238	transcription start site region 8238	1802 bp upstream