rs261796821 SNP Detail

Summary

• ID
  rs261796821
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:61675901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTAGGCAG TTCAATAATA GTGGCCAGTG
  TGATTGCCTA CTGAAGTATT GGGAAACAAA CAGGAAATCT CACAGCACAG GGGATGTTCA
  TCCATCCAGC AGGCAAAAAC AAGATAATGG AACCCAGGTC TAGACTCCTC TAATATTACT
  M
  AATCAAGGCA AATTATTTAT TGTCTTCTGC CTAGGAAGCT CCCAGGGCAT GAAATATTGA
  TTTAGGTGTT TGCTAGGCAT GGATGACTGT GTTGCTCTTC TTAATATATG ATGAATTGTT
  TCTATGTGTG CCATTATGAG GCTGAAAAGC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319741939	CHEV_1_61683316	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261796821					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:61675901 () rs orientation: forward

Symbol	Name	Function Class
4930587A21Rik	RIKEN cDNA 4930587A21 gene	within coordinates
Cpgi308	CpG island 308	1863 bp proximal
Rr411949	regulatory region 411949	1604 bp proximal