rs261810933 SNP Detail

Summary

• ID
  rs261810933
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:67145004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTCCTTTAC TTCCCATCAC
  AGGGGAACCT TGAGAAGATG TGCCGCACCC TGGAGGACCA ACTGAGTGAA GTGAAGACCA
  AGGAGGAGGA GCAGCAGCGC CTGATCAATG AACTGTCAAC CCAGAAGGCA CGCTTGCACA
  CAGAGTCAGG TCAGTCTGTG CCACACTAGC CTGGGAACAG CAAAGCATGA GAGGTCTGCC
  Y
  GATCCTGGAC GCTGGGGTCT TGCCCTGCAC AATGTGTACA AGAGATGGTT ACAAATGAAT
  GACTCTAAGC TATGATTAGA GGCGAGTTGG GAAATGAACC TCTTGGGCTT GGGAAAGTTT
  TGTTACCTCC ATAACCCTCA AGAATCCCCC ATTCTACAAT ACCAAAGAAA GCAGTTCACG
  AACATTCTGG AGACACTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719225	CHEV_11_67067680	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261810933					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67145004 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	Intron
Rr449442	regulatory region 449442	192 bp distal
Tssr3528	transcription start site region 3528	555 bp upstream
Tssr3529	transcription start site region 3529	611 bp upstream
Tssr102201	transcription start site region 102201	660 bp downstream
Tssr102202	transcription start site region 102202	171 bp downstream
Tssr102203	transcription start site region 102203	108 bp downstream
Tssr102204	transcription start site region 102204	277 bp upstream
Tssr102205	transcription start site region 102205	495 bp upstream
Tssr102206	transcription start site region 102206	599 bp upstream
Tssr102207	transcription start site region 102207	1243 bp upstream
Tssr102208	transcription start site region 102208	1413 bp upstream
Tssr102209	transcription start site region 102209	1448 bp upstream
Tssr102210	transcription start site region 102210	1466 bp upstream
Tssr102211	transcription start site region 102211	1476 bp upstream
Tssr102212	transcription start site region 102212	1498 bp upstream
Tssr102213	transcription start site region 102213	1650 bp upstream
Tssr108534	transcription start site region 108534	1574 bp upstream
Tssr108535	transcription start site region 108535	1468 bp upstream
Tssr108536	transcription start site region 108536	124 bp upstream
Tssr108537	transcription start site region 108537	103 bp upstream
Tssr108538	transcription start site region 108538	380 bp downstream
Tssr108539	transcription start site region 108539	588 bp downstream
Tssr108540	transcription start site region 108540	648 bp downstream
Tssr108541	transcription start site region 108541	1257 bp downstream
Tssr108542	transcription start site region 108542	1418 bp downstream
Tssr108543	transcription start site region 108543	1533 bp downstream