rs261818233 SNP Detail

Summary

• ID
  rs261818233
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:12329659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTCTCCC AGGGAGACTG
  AGGCAGGACC ATGTGGAAGT TGTCACCCAG GGCCAGTGGC CTGGTTTCTG TAGTGATAAA
  AGGAAGCTAT GAGAGGTAGT GAAAGGAGAG TAGCGGGAGG CAGAGAGAGG GTGGGGCTGC
  AGGCTTGGCT ACTCCAGAAG AAGGAAGAGT GGTGCCAACT CACTTCTGGG AGAGCAAGGA
  Y
  TGTGCAGTTG GGGGTAAGAG ACACCCACAT ATCAGCTTCC TCCTCCCCAG TCCTGGTCTC
  CGCAGAAGGA ACTAGAGGCA TGCCATGCAT GGGAGAGGAA GCTTCTACGT GCTCTGGTAG
  AGAGGAAAGT GGAAAGAGCC TAGCTAGTAC ACCACAGCAG CTCCTCAGCG GTCCTCCGAG
  AAGGCTCCAC GGAGTCAGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322497676	CHEV_8_12279659	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261818233					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12329659 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	Coding-NonSynonymous
Rr659697	regulatory region 659697	470 bp distal