rs261819506 SNP Detail

Summary

• ID
  rs261819506
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37298162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTGTAGAG GCCCTTCTTA CTGCTGCTAA
  GATTTTGGAA CGACCATCCA CACTGCCATG CTTAATGGGA ACACACACAT GGAATCACAC
  CACGTAGCTC TAACTCACAC ATCCTCTCAG CTCATCTTGC TTTCCCAGTA CATGAAACGA
  A
  AAGCAAGGTT GTTgccgggt gtggtggcac acacctttaa tcccagcact tgagaggcag
  aggcaggcgg atttctgagt tccaggacag ccagagttac acagagaaac cctgtctcgc
  aaaacaaaac aaaacaaaac aaaacaaaac                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319691070	CHEV_1_37315926	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261819506					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37298162 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Gm69908	predicted gene, 69908	1276 bp downstream
Rr409496	regulatory region 409496	427 bp distal