rs261862839 SNP Detail

Summary

• ID
  rs261862839
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:40528292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGGTTCTC AAGGGCCCCA GGAAGCAAGA
  TGACTAAGAG GGTAAGAGTT GCTTTGAGCC TGGCAAAGCC CTATTGGAAT TATTAGTCCA
  TTATCAGCAT CCTCTGCAAG TTCAGGGAGA TGGGCTCTAT GTGGTCCAGC AGGCCCAGTG
  R
  TGTGTACCAA AAAGCAGATG CCCGAGTGGA TGGATGAAGC CCCCATTGTG TGCCTTATAT
  GGGTCCTCTG AGCCTAGGAC AGGAGGGGTT CCCACTTTGG TGCTGCTCAT TATTCCAAAC
  CAGTTTTTAG TGGAGGGAAA GGAGATGCCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322193575	CHEV_7_48134238	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261862839					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:40528292 () rs orientation: forward

Symbol	Name	Function Class
A230077H06Rik	RIKEN cDNA A230077H06 gene	within coordinates
Gm25784	predicted gene, 25784	790 bp upstream
Gm28307	predicted gene 28307	within coordinates