rs261879500 SNP Detail

Summary

• ID
  rs261879500
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62225630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGACCTG GGTACAGTTG
  GAGGCCATCC TGGATTGCAT GAGACAGCAT CTCATTCAAA AAAATAAAAA TGTATATTCA
  AACTGTATAT AGGATAAAGG GATAATATCA AATATATAAC AAGCACTTTC AGTTCAATAA
  CAGAACCCCA AAGAGCCCAA CTAAAGCATG GGCAAAAGGC ATTTCTCCAA AGGAAAAATC
  Y
  ATTTGTCAGC AGATACATGC AACGTGCTCA ATACTATAGA TCATTAAAGA AACTTATACT
  GAAACTATAC TGAGTTCTGG TCTGGAGGCT TATGGCTGTC TTAGCACTTT CAGGGCTGAG
  GAAGGAAGAT AGCTACAAGT TTGAGGTCAG CTTGGGATGC ATGTAGGGGA AGATCCTGTC
  TCTGAAAACC AAAGCAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325648546	CHEV_18_62252213	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261879500					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62225630 () rs orientation: forward

Symbol	Name	Function Class
Gm41750	predicted gene, 41750	648 bp upstream