rs261907139 SNP Detail

Summary

• ID
  rs261907139
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:27722809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCAGCAAC CAAGAGCTAA
  AAGTAACAGA CCTGAAGCTT AGAATATTCT TGACAAGACA CCATGTTTGA TGCTGGTCTG
  GGATACTTGA GGCTCAGTAT TTAAAAAAAT CTGGGGGTGG GGGGAGAACA CTTTAAATGG
  GTTTCCCTTC TCCTTTCTAA TGGTGCTGGC GATTTATGCA TGCTGGGCGA GGCTTCTACC
  K
  CTAGGTTAGC CCCAGCTCTT GTTTTGCCCT TTTGTTTTAC ACAGGTCTCA CTAAGTGACC
  AAGGTTTGGC CTTGGAATCA CTTTGCAACC TAGGCAGGGC TTGAGTTTAT CATCTTCCTG
  AGGAGATTTC ATTAGTAGCT GAGATTACAG GGTACCACAC TCGCCTCTCA AACAGTCATT
  AAAGATCAAA TCCACTAGCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322535755	CHEV_8_28343253	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261907139					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27722809 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adrb3	adrenergic receptor, beta 3			Intron
				Noncoding-Transcript-Variant
Gm45470	predicted gene 45470			within coordinates
Gm63998	predicted gene, 63998			600 bp downstream
Rr381848	regulatory region 381848			1125 bp upstream
Tssr80798	transcription start site region 80798			1934 bp upstream
Tssr80799	transcription start site region 80799			1643 bp downstream