rs261971491 SNP Detail

Summary

• ID
  rs261971491
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127726622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCGTTAATC CTGCCTGCTC
  CTGACCTGGG CGCCCCCCTG ACCCTGATCT TGCGCAGCTT GCCTGCTCAG GTGCTCTCTG
  CTAGTCTGTA GTTTCTCCTG TTCGAGCCTT GTTTCCTTCT TCCTTGTTTC CTTCTCCTGC
  TCCTCCTGCT CTGTGGTGCT TTGAATGAGA ATTGACCCTC AGAAGTTTAA AGCCCTGTCC
  Y
  GGGTATGAGC CACCTTTGGG AAGGATTGGG AGGTGTGGCC TTGTTGGAGG AGATGGGCTT
  TGAGATTACT AAGGACTCCC TCTACTCAAG CCAGCTCTGT TTCTTGCTTC CTTCAGACTT
  CATCTCTCAT GCTGCAGCAG CTGCCTGCCT CAATGCTTGC ACTCAGCGTC GTAGACTCTA
  ACCCAGCAGA ACCCCTGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323530340	CHEV_10_127327809	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs261971491					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127726622 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	1936 bp upstream
Rr226507	regulatory region 226507	1422 bp distal
Rr226508	regulatory region 226508	within coordinates
Rr385469	regulatory region 385469	1029 bp upstream