rs262032728 SNP Detail

Summary

• ID
  rs262032728
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69815307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGCCACA CACACCAGTC
  ACTCCCATTC TGCCAGCTAG AGCCACCGAG GCCTGTGCTC TCTACCTGCA CCTGCCTCAA
  GCTGAGGTTT TGTCCCTTGT AACAAAGAAG TCTCGACTAA TGCAGCACAC TAAGTACTTA
  GCTTGCATTA GGTTTTTGAT GGCCTTAAAT GTCCCTTTGG GTGCTGGAGA GATGGTCCAG
  M
  GGTTAAGAGC AATGACTGCT CTTCCAAAGG TCCTGAGTTC AAATCCCAGC AACCACATGT
  AATGAGATTG GATGCCCTCT TCTGGTGTGT CTGAAGACAG CTACAGTATA CTCACATATA
  ATAAATAAAT AAATCTTTTT AAAAAAAACA ACGTCCTTTT GGTGATTACT TTTGTATCTT
  TTTCTCATCT ATTTATCTAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324085527	CHEV_12_70869520	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262032728					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69815307 () rs orientation: forward

Symbol	Name	Function Class
Cdkl1	cyclin dependent kinase like 1	within coordinates
Rr467132	regulatory region 467132	1864 bp distal
Rr467133	regulatory region 467133	742 bp distal
Tssr116524	transcription start site region 116524	1241 bp upstream
Tssr116525	transcription start site region 116525	770 bp downstream
Tssr116526	transcription start site region 116526	1200 bp downstream