rs262053967 SNP Detail

Summary

• ID
  rs262053967
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8617602 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTTGTTA GTCACAATCT
  AAGAAGAAAA TTCTGAAATA TCTTTGTGCT TACTTTCCTT CATGTGAATC ATGAAGCCAC
  TGCATTCACA TTCAAGCACC TTCGTTAGGG CAGCCATGTT TATGTATACT ATATCCATGT
  ATGCATATAA TATGCACGAA GCCACGTTTG TGTATGGATA TCATATGTTT ATGTATATTA
  Y
  AAGCCTTTTA TTTTGGAAAC TTTTGTGTTT AGAACTGAAT CATTTCCTTT CTCATCAGGG
  TACAGCTAGA TGTGAGACAA AGCTAAAATG TCTCCCTTTA ATTTTTAAAC TATTGTTCCA
  AGAAAATCTA TTCAAAAATT ATGTCTATCA CACCCCATTG AGTCAACTAA GACACAGGAC
  TAATAACGAG AGACATTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321463549	CHEV_5_8567602	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262053967					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8617602 () rs orientation: forward

Symbol	Name	Function Class
Gm72884	predicted gene, 72884	within coordinates
Rr130297	regulatory region 130297	2 bp distal
Rundc3b	RUN domain containing 3B	within coordinates
Tssr45118	transcription start site region 45118	492 bp downstream
Tssr45119	transcription start site region 45119	479 bp downstream