rs262124837 SNP Detail

Summary

• ID
  rs262124837
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:89732057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GACCAGAGA CATAGCGGGa ggagtctaag
  tcactgttcc attgagacat gtgtacatct tgtatggagc tgctttattc tcaacagcca
  agatatggaa tcagcctagg taccatcgac agatgaaggg acaaagaaag tgtgatgaac
  R
  atgaacaaga gattcccccc cccaataata aagaacaaaa ctatatgatc tgcaagaaag
  tagatggccc tggaggtcac tgtgctaagg gaagaaagcc agactcacgg actagtatta
  tctactttct cttataGTCA GAAACTAGAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322769749	CHEV_8_91529328	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262124837					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:89732057 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20796	CpG island 20796	1005 bp proximal
Gm56831	predicted gene, 56831	353 bp downstream
Rr1386	regulatory region 1386	732 bp distal
Rr366841	regulatory region 366841	within coordinates
Rr406251	regulatory region 406251	390 bp proximal
Tssr78676	transcription start site region 78676	1566 bp downstream
Tssr82368	transcription start site region 82368	1183 bp downstream
Tssr82369	transcription start site region 82369	1211 bp downstream
Tssr82370	transcription start site region 82370	1230 bp downstream
Tssr82371	transcription start site region 82371	1242 bp downstream
Tssr82372	transcription start site region 82372	1268 bp downstream
Tssr82373	transcription start site region 82373	1850 bp downstream