rs262131850 SNP Detail

Summary

• ID
  rs262131850
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129227881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCTCACAC TACTGCTGAA
  AACACTCGCC CCCACTTCAG TTAGGCAGAC CCCAGATTTA TCTTGCTATT TATTAACCTT
  ATAAATGACT TGAGAAATCA AATGTTTTGT TGAATAAACT GGACCCAGAA TAACTTTTGA
  AAACGGTCAA GTTTTATATT ACATGGCCAA CTCCAGTCTT AAGAATGGCT ATTCAACTCC
  R
  TGCTGAGGGA AAAAACAAAA ACAGGGCTGG AGAGCTGGCT CAGCGGCTAA GAGCATTGAC
  TGCTCTTCCC AAGGTCCTGA GTTCAAATCC CAGCAACCAC ATGGTGGCTC ACAACAATCT
  GTAATGGGAC CCAATGCCCT CTTCTGGCTT CAGTGTATTC ATACAAATAG AGATGACTTA
  AAAAAAAAAA GTAAAAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321312028	CHEV_4_129011332	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262131850					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129227881 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14889	CpG island 14889	518 bp proximal
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Rr367701	regulatory region 367701	1271 bp upstream
Rr367702	regulatory region 367702	1719 bp upstream
Rr600200	regulatory region 600200	1233 bp proximal
Rr600201	regulatory region 600201	1272 bp proximal
Tssr39141	transcription start site region 39141	1505 bp upstream
Tssr39142	transcription start site region 39142	1874 bp upstream
Tssr39143	transcription start site region 39143	1928 bp upstream
Tssr43492	transcription start site region 43492	1155 bp downstream
Tssr43493	transcription start site region 43493	1209 bp downstream
Tssr43494	transcription start site region 43494	1236 bp downstream
Zbtb8os	zinc finger and BTB domain containing 8 opposite strand	1444 bp upstream