AGGGGAGGG CTGTGTCACC TGCAGCTCAG GGACTCAGCA AAGAACAGTC TGTGACCTGT TAAGCAGCCC AGGACACTCT ACATTGACAA GGAGAAGCCA GTCAGAGGGC CTGGTGCCTT CTAGTGGGAA CAATCCCTCT CCCTGTCAGT R CTCCATAGCC TCTACAGCTC TACACCGCCC TGGAGCGCCA CAAGTCAACC AGTGCTCCAA CCCACTCCGA ACACACCAGG AACACCACTT GGGTAAGGAT CCGAGCCCAG CAAGAGGATG CTGCAATCGA TTAGCAATGT CTGACACGAG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320622154 | CHEV_2_173091037 | CHEVERUD | SCREENING_POP | f | SNP | G | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs262166771 | SNP | G | A |
Location: Chr2:173107329 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pmepa1 | prostate transmembrane protein, androgen induced 1 | Intron | ||||||
Rr571915 | regulatory region 571915 | within coordinates | ||||||
Rr571916 | regulatory region 571916 | 581 bp distal | ||||||
Rr571917 | regulatory region 571917 | 230 bp proximal | ||||||
Tssr22050 | transcription start site region 22050 | 479 bp downstream | ||||||
Tssr27982 | transcription start site region 27982 | 398 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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