rs262197252 SNP Detail

Summary

• ID
  rs262197252
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5679405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTATGAGT CATAGAATAT
  AGAAAATAAA TTATACATCT CTTTTTCAGA AAATCATCAA AGTGGACTAT GTATATAACT
  GATGACCAAG AAGGTATCCT TGTGTAGCTA TGTCTACTCT GGAATCTTTA ATCTCTGCAT
  CCTGAGTTCT GTGAATAAAA GTGTGTATTG CCACACCTGA CATGATGGTT TAATCTTAAT
  Y
  GTCAACTTGA CTCAATCAAT CACCTAGGAA ACAACTTTGG GTGTGTCTTT AAAGGAATTC
  CTGAAAAGTT TTAAGTGAGT AGGGAAGGCC AAACTTAAGT ATGAGTAACA TCATCCCAAG
  GACGGGAATA CTAGACTACT GAATAGAAAA AGATGGAAAG AAAGATGGGC ACCAGGATCT
  CTCCCTCTCC CTGCTCCATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324222378	CHEV_13_5628652	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262197252					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5679405 () rs orientation: forward

Symbol	Name	Function Class
Rr279792	regulatory region 279792	1851 bp proximal
Rr284365	regulatory region 284365	1005 bp distal