rs262275941 SNP Detail

Summary

• ID
  rs262275941
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7554808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTCTTAG TGTCATTTCA
  CAAGGTTTTG TTGCGGAAGT TATTTGGCTG TCCTCAAAGC TCAAGATTCC CTGACTCCTC
  TAGAGAGAAA AGTTCCCAAA GTCCGAGGCA TGAGTCACTT CACTCAGTTT TGATGAGTAA
  TCTCAGGTGT CACTGAACCT TGTTCGGAAG AAGAGGGGAG GAGGGCGTCA GATTGTCAGA
  S
  GAAGAAAACA GGTCTCTCTG GATTGGATGG CAAGACCTCG ACTTCCCTAA AATTGCGTCA
  TTTCGAACAC AATTTGGTCC AGATGTTATG GACTCCGACG GGTTACCGTC TCGGAAACTC
  TACATCACGC AAGCGAAAGG CGAGGGGGCG GCTAATTAAA TATTGAGCAG AAAGTCGCGT
  GGGGAGAGTG TCACGTGGCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321734091	CHEV_6_7504808	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262275941					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7554808 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17147	CpG island 17147	within coordinates
Rr146475	regulatory region 146475	within coordinates
Tac1	tachykinin 1	253 bp upstream
Tssr54885	transcription start site region 54885	245 bp upstream