rs262292037 SNP Detail

Summary

• ID
  rs262292037
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142216626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGTGTCTG AGTTAAAAAA
  AATTTTTTTT TCCAAATTGT TAAGTTAAAG GGACCCAGAT TTGATGCAGA AAAAAATGAT
  CAGTGTTCAA GGATTGGAGA CATTCAACAT TCTAATATAA AGAAAAAGGA CTTGGCCAAG
  AGTTAATTTT GTGCCATCTG TGACCCAGAA AGACATGGAA CAGTCATATA AGACTTGGGA
  K
  AGCATGGAAA GCCCTCTGCC ACATAGAAGT TCATGCCTTA CATCATTGCT CAGCCTGCTT
  TGGGGGCTTT AGTGAGAGAG TTTATATTTT ATATTTTAAA GAACCCTAAC CATGGCCAGA
  ATGCTTGCAG GAGCTCTAGG GAGCCCCAAA GCCTTGTGAC CAGTGTGTAT TCGTGGAATT
  TTTTGGGGGG GGGTCTTGTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471556	CHEV_7_149848794	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262292037					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142216626 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19968	CpG island 19968	1454 bp distal
Cpgi19969	CpG island 19969	958 bp proximal
Gm49394	predicted gene, 49394	within coordinates
Igf2	insulin-like growth factor 2	within coordinates
Igf2os	insulin-like growth factor 2, opposite strand	within coordinates
Rr316	regulatory region 316	1355 bp proximal
Rr658254	regulatory region 658254	1595 bp distal
Rr658255	regulatory region 658255	1240 bp distal
Rr658256	regulatory region 658256	24 bp proximal
Tssr2464	transcription start site region 2464	1968 bp upstream
Tssr2465	transcription start site region 2465	1805 bp upstream
Tssr2466	transcription start site region 2466	1785 bp upstream
Tssr75891	transcription start site region 75891	1901 bp upstream
Tssr75892	transcription start site region 75892	1849 bp upstream
Tssr75893	transcription start site region 75893	1831 bp upstream
Tssr75894	transcription start site region 75894	1683 bp upstream
Tssr75895	transcription start site region 75895	1651 bp upstream
Tssr75896	transcription start site region 75896	1620 bp upstream
Tssr75897	transcription start site region 75897	1602 bp upstream
Tssr75898	transcription start site region 75898	1575 bp upstream
Tssr75899	transcription start site region 75899	1032 bp upstream
Tssr75900	transcription start site region 75900	1009 bp upstream
Tssr75901	transcription start site region 75901	1774 bp downstream
Tssr75902	transcription start site region 75902	1805 bp downstream
Tssr75903	transcription start site region 75903	1896 bp downstream